Publications #

1. Qu, W. et al., PCR Primer Design for the Rapidly Evolving SARS-CoV-2 Genome. PCR Primer Design (3rd edition), 185-197 (Springer 2021).
2. Wang, K. et al., MFEprimer-3.0: quality control for PCR primers. Nucleic acids research 47, W610–W613 (2019).
3. Xie, S. et al., sRNAPrimerDB: comprehensive primer design and search web service for small non-coding RNAs. Bioinformatics 35, 1566–1572 (2019).
4. Zhao, C. et al., CRISPR-offinder: a CRISPR guide RNA design and off-target searching tool for user-defined protospacer adjacent motif. International journal of biological sciences 13, 1470 (2017).
5. Qu, W. & Zhang, C., Selecting specific PCR primers with MFEprimer. PCR Primer Design (2nd edition), 201–213 (Springer, 2015).
6. Qu, W. et al., MFEprimer-2.0: a fast thermodynamics-based program for checking PCR primer specificity. Nucleic acids research 40, W205–W208 (2012).
7. Zhou, Y. et al., VizPrimer: a web server for visualized PCR primer design based on known gene structure. Bioinformatics 27, 3432–3434 (2011).
8. Qu, W. et al., Reliability analysis of the Ahringer Caenorhabditis elegans RNAi feeding library: a guide for genome-wide screens. BMC genomics 12, 170 (2011).
9. Shen, Z. et al., MPprimer: a program for reliable multiplex PCR primer design. BMC bioinformatics 11, 143 (2010).
10. Qu, W., Shen, Z., Zhao, D., Yang, Y. & Zhang, C. MFEprimer: multiple factor evaluation of the specificity of PCR primers. Bioinformatics 25, 276–278 (2009).